A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
A AccessFold: Overview AccessFold: References AccessFold: Run Information Alignment File Format alignments AllSub: Overview AllSub: References AllSub: Run Information
N
B
O
C
Calculating Ensemble Energy Calculating Common Structures For Multiple Sequences Calculating Common Structures For Two Sequences CircleCompare: Overview CircleCompare: References CircleCompare: Run Information Comparing Two Structures Converting Bracket Files to CT Files Converting CT Files to Bracket Files CT File Format ct2dot: Overview ct2dot: References ct2dot: Run Information cuda: partition-cuda
P
partition: Overview partition: References partition: Run Information Partition Function Single Strand PARTS: Overview PARTS: References PARTS: Run Information pathways for analysis phmm Probability of Pairs in Two Unaligned Sequences ProbabilityPlot: Overview ProbabilityPlot: References ProbabilityPlot: Run Information ProbablePair: Overview ProbablePair: References ProbablePair: Run Information ProbKnot: Overview ProbKnot: References ProbKnot: Run Information Pseudoknot Prediction: ProbKnot Pseudoknot Prediction: ShapeKnots
D
Q
E
R
F
S
scorer: Overview scorer: References scorer: Run Information Scoring a Structure's Quality Sequence File Format SHAPE Restraint File Format ShapeKnots Specifying Thermodynamic Parameters Stochastic Sampling
G
T
H
U
I
Identifying Pseudoknots Information flow
V
J
W
K
X
L
Y
M
MaxExpect: Overview MaxExpect: References MaxExpect: Run Information Maximum Expected Accuracy Structures Multifind: Overview Multifind: Run Information multilign: Overview multilign: References multilign: Run Information multilign-smp: Overview multilign-smp: References multilign-smp: Run Information
Z
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