public class ConstraintsMenu extends RolloverMenu
Modifier and Type | Class and Description |
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class |
ConstraintsMenu.NucOrHelixDialog
An inner class which creates a dialog that sets constraints on single
nucleotides or helices.
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RolloverMenu.RolloverListener
JMenu.AccessibleJMenu, JMenu.WinListener
JMenuItem.AccessibleJMenuItem
AbstractButton.AccessibleAbstractButton, AbstractButton.ButtonChangeListener
JComponent.AccessibleJComponent
Container.AccessibleAWTContainer
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy
Modifier and Type | Field and Description |
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private RNAstructureBackendCalculator |
backend
The back end calculator that's linked to this menu.
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private static long |
serialVersionUID |
private int |
str
The strand this constraints menu deals with.
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popupListener
actionListener, BORDER_PAINTED_CHANGED_PROPERTY, changeEvent, changeListener, CONTENT_AREA_FILLED_CHANGED_PROPERTY, DISABLED_ICON_CHANGED_PROPERTY, DISABLED_SELECTED_ICON_CHANGED_PROPERTY, FOCUS_PAINTED_CHANGED_PROPERTY, HORIZONTAL_ALIGNMENT_CHANGED_PROPERTY, HORIZONTAL_TEXT_POSITION_CHANGED_PROPERTY, ICON_CHANGED_PROPERTY, itemListener, MARGIN_CHANGED_PROPERTY, MNEMONIC_CHANGED_PROPERTY, model, MODEL_CHANGED_PROPERTY, PRESSED_ICON_CHANGED_PROPERTY, ROLLOVER_ENABLED_CHANGED_PROPERTY, ROLLOVER_ICON_CHANGED_PROPERTY, ROLLOVER_SELECTED_ICON_CHANGED_PROPERTY, SELECTED_ICON_CHANGED_PROPERTY, TEXT_CHANGED_PROPERTY, VERTICAL_ALIGNMENT_CHANGED_PROPERTY, VERTICAL_TEXT_POSITION_CHANGED_PROPERTY
accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
BOTTOM, CENTER, EAST, HORIZONTAL, LEADING, LEFT, NEXT, NORTH, NORTH_EAST, NORTH_WEST, PREVIOUS, RIGHT, SOUTH, SOUTH_EAST, SOUTH_WEST, TOP, TRAILING, VERTICAL, WEST
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH
Constructor and Description |
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ConstraintsMenu(RNAstructureBackendCalculator calc)
General Constructor.
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Modifier and Type | Method and Description |
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void |
addGeneralSection()
Add a menu section of general constraints commands.
|
void |
addMaxPairingDistanceSection()
Add a menu section that handles maximum pairing distance.
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void |
addSaveRestoreSection()
Add a menu section that handles saving and restoring constraints.
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void |
addSHAPESection()
Add a menu section that handles SHAPE constraints.
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void |
addShowResetSection()
Add a menu section that handles showing and resetting constraints.
|
void |
buildDynalignAlignmentMenu()
Build a complete menu that handles Dynalign alignment constraints.
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void |
buildMaxLoopMenu()
Build a complete menu that handles maximum loop size.
|
ConstraintsMenu |
buildTemperatureMenu()
Build a complete menu that handles temperature.
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void |
buildUnimolecularMenu()
Build a complete menu that handles if unimolecular pairs are allowed.
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protected void |
doMenuActions(String command)
Do any actions specific to this menu.
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private boolean |
showDeletionConfirmation()
Show a dialog that asks whether constraints should be deleted.
|
convertToolTips
actionPerformed, addCheckBoxMenuItem, addMenuItem, addMenuItem, addMenuItem, insertMenuItem
add, add, add, add, add, addMenuListener, addSeparator, applyComponentOrientation, createActionChangeListener, createActionComponent, createWinListener, doClick, fireMenuCanceled, fireMenuDeselected, fireMenuSelected, getAccessibleContext, getComponent, getDelay, getItem, getItemCount, getMenuComponent, getMenuComponentCount, getMenuComponents, getMenuListeners, getPopupMenu, getPopupMenuOrigin, getSubElements, getUIClassID, insert, insert, insert, insertSeparator, isMenuComponent, isPopupMenuVisible, isSelected, isTearOff, isTopLevelMenu, menuSelectionChanged, paramString, processKeyEvent, remove, remove, remove, removeAll, removeMenuListener, setAccelerator, setComponentOrientation, setDelay, setMenuLocation, setModel, setPopupMenuVisible, setSelected, updateUI
actionPropertyChanged, addMenuDragMouseListener, addMenuKeyListener, configurePropertiesFromAction, fireMenuDragMouseDragged, fireMenuDragMouseEntered, fireMenuDragMouseExited, fireMenuDragMouseReleased, fireMenuKeyPressed, fireMenuKeyReleased, fireMenuKeyTyped, getAccelerator, getMenuDragMouseListeners, getMenuKeyListeners, init, isArmed, processKeyEvent, processMenuDragMouseEvent, processMenuKeyEvent, processMouseEvent, removeMenuDragMouseListener, removeMenuKeyListener, setArmed, setEnabled, setUI
addActionListener, addChangeListener, addImpl, addItemListener, checkHorizontalKey, checkVerticalKey, createActionListener, createActionPropertyChangeListener, createChangeListener, createItemListener, doClick, fireActionPerformed, fireItemStateChanged, fireStateChanged, getAction, getActionCommand, getActionListeners, getChangeListeners, getDisabledIcon, getDisabledSelectedIcon, getDisplayedMnemonicIndex, getHideActionText, getHorizontalAlignment, getHorizontalTextPosition, getIcon, getIconTextGap, getItemListeners, getLabel, getMargin, getMnemonic, getModel, getMultiClickThreshhold, getPressedIcon, getRolloverIcon, getRolloverSelectedIcon, getSelectedIcon, getSelectedObjects, getText, getUI, getVerticalAlignment, getVerticalTextPosition, imageUpdate, isBorderPainted, isContentAreaFilled, isFocusPainted, isRolloverEnabled, paintBorder, removeActionListener, removeChangeListener, removeItemListener, removeNotify, setAction, setActionCommand, setBorderPainted, setContentAreaFilled, setDisabledIcon, setDisabledSelectedIcon, setDisplayedMnemonicIndex, setFocusPainted, setHideActionText, setHorizontalAlignment, setHorizontalTextPosition, setIcon, setIconTextGap, setLabel, setLayout, setMargin, setMnemonic, setMnemonic, setMultiClickThreshhold, setPressedIcon, setRolloverEnabled, setRolloverIcon, setRolloverSelectedIcon, setSelectedIcon, setText, setUI, setVerticalAlignment, setVerticalTextPosition
addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update
add, add, add, addContainerListener, addPropertyChangeListener, addPropertyChangeListener, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, transferFocusDownCycle, validate, validateTree
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
processKeyEvent, processMouseEvent
private RNAstructureBackendCalculator backend
private static final long serialVersionUID
private int str
public ConstraintsMenu(RNAstructureBackendCalculator calc)
calc
- The back end calculator connected to this menu.public void addGeneralSection()
public void addMaxPairingDistanceSection()
public void addSaveRestoreSection()
public void addSHAPESection()
public void addShowResetSection()
public void buildDynalignAlignmentMenu()
public void buildMaxLoopMenu()
public ConstraintsMenu buildTemperatureMenu()
public void buildUnimolecularMenu()
protected void doMenuActions(String command)
RNAstructureMenu
doMenuActions
in class RolloverMenu
command
- The command that signifies a particular action.private boolean showDeletionConfirmation()